Journal: Cancer Immunology, Immunotherapy : CII
Article Title: γδ T cells in human colon adenocarcinomas comprise mainly Vδ1, Vδ2, and Vδ3 cells with distinct phenotype and function
doi: 10.1007/s00262-024-03758-7
Figure Lengend Snippet: Vδ chain usage in tumour-infiltrating γδ T cells. Single cell suspensions were isolated from frozen tumour specimens and the CDR3 region analysed with ultra-sensitive sequencing using unique molecular identifiers. A The number of clones in the ten most frequent clonotypes from each patient. Colour coding shows the Vδ usage in the respective clonotypes. B Chord diagram showing the distribution of clones using the different Vδ chains in individual patients. C Gini-Simpson index of diversity was calculated for each tumour and plotted as a function of microsatellite status and tumour stage. Symbols represent individual values and the line the median. n = 10
Article Snippet: Microsatellite status was determined as previously described using the microsatellite instability (MSI) Analysis System v.1.2 (ProMega) [ ].
Techniques: Isolation, Sequencing, Clone Assay